Bit-parallel algorithms for computing all the runs in a string

Kazunori Hirashima, Hideo Bannai, Wataru Matsubara, Akira Ishino, Ayumi Shinohara

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Citations (Scopus)

Abstract

We present three bit-parallel algorithms for computing all the runs in a string. The algorithms are very efficient especially for computing all runs of short binary strings, allowing us to run the algorithm for all binary strings of length up to 47 in a few days, using a PC with the help of GPGPU. We also present some related statistics found from the results.

Original languageEnglish
Title of host publicationProceedings of the Prague Stringology Conference 2009
Pages203-213
Number of pages11
Publication statusPublished - 2009 Dec 1
EventPrague Stringology Conference 2009, PSC 2009 - Prague, Czech Republic
Duration: 2009 Aug 312009 Sept 2

Publication series

NameProceedings of the Prague Stringology Conference 2009

Other

OtherPrague Stringology Conference 2009, PSC 2009
Country/TerritoryCzech Republic
CityPrague
Period09/8/3109/9/2

ASJC Scopus subject areas

  • Mathematics(all)

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