TY - JOUR
T1 - Complete genome sequence of polyvinyl alcoholdegrading strain Sphingopyxis sp. 113P3 (NBRC 111507)
AU - Ohtsubo, Yoshiyuki
AU - Nagata, Yuji
AU - Numata, Mitsuru
AU - Tsuchikane, Kieko
AU - Hosoyama, Akira
AU - Yamazoe, Atsushi
AU - Tsuda, Masataka
AU - Fujita, Nobuyuki
AU - Kawai, Fusako
N1 - Publisher Copyright:
© 2015 Ohtsubo et al.
PY - 2015
Y1 - 2015
N2 - Strain 113P3 was isolated from activated sludge and identified as a polyvinyl alcohol (PVA)-degrading Pseudomonas species; it was later reidentified as Sphingopyxis species. Only three genes are directly relevant to the metabolism of PVA and comprise the pva operon, which was deposited as accession no. AB190228. Here, we report the complete genome sequence of strain 113P3, which has been conserved as a stock culture (NBRC 111507) at the Biological Resource Center, National Institute of Technology and Evaluation (NITE) (Tokyo, Japan). The genome of strain 113P3 is composed of a 4.4-Mb circular chromosome and a 243-kb plasmid. The whole finishing was conducted in silico except for four PCRs. The sequence corresponding to AB190288 exists on the chromosome.
AB - Strain 113P3 was isolated from activated sludge and identified as a polyvinyl alcohol (PVA)-degrading Pseudomonas species; it was later reidentified as Sphingopyxis species. Only three genes are directly relevant to the metabolism of PVA and comprise the pva operon, which was deposited as accession no. AB190228. Here, we report the complete genome sequence of strain 113P3, which has been conserved as a stock culture (NBRC 111507) at the Biological Resource Center, National Institute of Technology and Evaluation (NITE) (Tokyo, Japan). The genome of strain 113P3 is composed of a 4.4-Mb circular chromosome and a 243-kb plasmid. The whole finishing was conducted in silico except for four PCRs. The sequence corresponding to AB190288 exists on the chromosome.
UR - http://www.scopus.com/inward/record.url?scp=85009179138&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85009179138&partnerID=8YFLogxK
U2 - 10.1128/genomeA.01169-15
DO - 10.1128/genomeA.01169-15
M3 - Article
AN - SCOPUS:85009179138
SN - 2169-8287
VL - 3
JO - Genome Announcements
JF - Genome Announcements
IS - 5
M1 - e01169-15
ER -