TY - JOUR
T1 - Conformational transition induced in the aspartate:alanine antiporter by l-Ala binding
AU - Suzuki, Satomi
AU - Chiba, Fumika
AU - Kimura, Takuya
AU - Kon, Nanase
AU - Nanatani, Kei
AU - Abe, Keietsu
N1 - Funding Information:
We thank the Kikkoman Corporation for the gift of the Tetragenococcus halophilus asp operon. We also thank Dr. Ichiro Yamato (Department of Biological Science and Technology, Tokyo University of Science) and Dr. Hiroshi Yoneyama (Department of Microbial Biotechnology, Tohoku University) for their critical reading of this article. We thank Dr. Shushi Nagamori (Department of Laboratory Medicine, The Jikei University School of Medicine) for his advice. This paper is dedicated to our mentor Dr. Peter C. Maloney, who passed away on 12 December 2013.
Funding Information:
This work was supported partly by the Japan Society for the Promotion of Science through the Grants-in-Aid for Exploratory Research program (Grant nos. 2265108 and 15K14911 to K.A.), the Grants-in-Aid for Scientific Research program (Grant no. 16K07653 and 20K05779 to K.N.), the Fostering Joint International Research program (Grant no. 17KK0148 to K.N.), and a Grant-in-Aid for JSPS Fellows 25⋅3082 to S.S. This study was also partly supported by a Research Grant from Kato Memorial Bioscience Foundation to K.N., the NISR Research Grant from the Noda Institute for Scientific Research to K.A., and a NISR Young Investigator Research Grant from the Noda Institute for Scientific Research to K.N.
Publisher Copyright:
© 2022, The Author(s).
PY - 2022/12
Y1 - 2022/12
N2 - An aspartate:alanine antiporter (AspT) from the lactic acid bacterium Tetragenococcus halophilus catalyzes the electrogenic aspartate1-:alanine0 exchange reaction. Our previous kinetic analyses of transport reactions mediated by AspT in reconstituted liposomes suggested that, although the substrate transport reactions are physiologically coupled, the putative binding sites of l-aspartate (-Asp) and l-alanine (-Ala) are independently located on AspT. By using the fluorescent probe Oregon Green maleimide (OGM), which reacts specifically with cysteine, we also found that the presence of l-Asp changes the conformation of AspT. In this study, we conducted an OGM labeling assay in the presence of l-Ala. The labeling efficiency of single cysteine mutants (G62C and P79C) in transmembrane helix 3 of the AspT showed novel patterns depending on the presence of l-Ala or analogs. A concentration-dependent shift of AspT from the conformation in the presence of one substrate to that specific to the substrate added subsequently (l-Ala or l-Asp) was observed. Moreover, size-exclusion-chromatography-based thermostability assays indicated that the thermal stability of AspT in the presence of l-Ala differed from that in the presence of l-Asp. From these results, we concluded that l-Ala binding yields a conformation different from the apo or l-Asp binding conformations.
AB - An aspartate:alanine antiporter (AspT) from the lactic acid bacterium Tetragenococcus halophilus catalyzes the electrogenic aspartate1-:alanine0 exchange reaction. Our previous kinetic analyses of transport reactions mediated by AspT in reconstituted liposomes suggested that, although the substrate transport reactions are physiologically coupled, the putative binding sites of l-aspartate (-Asp) and l-alanine (-Ala) are independently located on AspT. By using the fluorescent probe Oregon Green maleimide (OGM), which reacts specifically with cysteine, we also found that the presence of l-Asp changes the conformation of AspT. In this study, we conducted an OGM labeling assay in the presence of l-Ala. The labeling efficiency of single cysteine mutants (G62C and P79C) in transmembrane helix 3 of the AspT showed novel patterns depending on the presence of l-Ala or analogs. A concentration-dependent shift of AspT from the conformation in the presence of one substrate to that specific to the substrate added subsequently (l-Ala or l-Asp) was observed. Moreover, size-exclusion-chromatography-based thermostability assays indicated that the thermal stability of AspT in the presence of l-Ala differed from that in the presence of l-Asp. From these results, we concluded that l-Ala binding yields a conformation different from the apo or l-Asp binding conformations.
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U2 - 10.1038/s41598-022-19974-z
DO - 10.1038/s41598-022-19974-z
M3 - Article
C2 - 36151227
AN - SCOPUS:85138460247
SN - 2045-2322
VL - 12
JO - Scientific Reports
JF - Scientific Reports
IS - 1
M1 - 15871
ER -