TY - JOUR
T1 - Dictyobacter aurantiacus gen. nov., sp. nov., a member of the family Ktedonobacteraceae, isolated from soil, and emended description of the genus thermosporothrix
AU - Yabe, Shuhei
AU - Sakai, Yasuteru
AU - Abe, Keietsu
AU - Yokota, Akira
AU - Také, Akira
AU - Matsumoto, Atsuko
AU - Sugiharto, Arwan
AU - Susilowati, Dwiningsih
AU - Hamada, Moriyuki
AU - Nara, Kazuhide
AU - Sudiana, Made
AU - Otsuka, Shigeto
N1 - Funding Information:
This work was supported in part by both MEXT/JSPS KAKENHI (grant number 93001018) and SATREPS/JST-JICA, Japan.
Publisher Copyright:
© 2017 IUMS.
PY - 2017
Y1 - 2017
N2 - A mesophilic, Gram-stain-positive, spore-forming bacterium that formed branched mycelia was isolated from paddy soil in Gunung Salak (Mount Salak), West Java, Indonesia. This strain, designated S-27T, grew at temperatures between 20 and 37 °C; the optimum growth temperature was 25 to 30 °C, and no growth was observed at 15 or 45 °C. The pH range for growth was pH 3.5 to 8.6; the optimum pH was 6.0, and no growth was observed at pH 3.0 or 9.2. Strain S-27T was able to hydrolyse polysaccharides such as starch, cellulose and xylan. The G+C content of the DNA of strain S-27T was 55.7 mol%. The major fatty acids were iso-C17: 0 and C16: 1 2-OH, and the major menaquinone was MK-9 (H2). The cell wall of strain S-27T contained Dglutamic acid, glycine, L-alanine, D-alanine, L-ornithine and β-alanine in a molar ratio of 1.0: 1.6: 1.4: 0.6: 0.9: 1.1. The polar lipids consisted of phosphatidylglycerol, phosphatidylinositol and two glycolipids. The major cell-wall sugar was arabinose. Detailed phylogenetic analysis based on 16S rRNA gene sequences indicated that strain S-27T belongs to the order Ktedonobacterales and is most closely related to Ktedonobacter racemifer SOSP1-21T (89.6% sequence identity). On the basis of its chemotaxonomic and phenotypic features and phylogenetic position, we concluded that strain S-27T represents a novel genus and species, for which we propose the name Dictyobacter aurantiacus gen. nov., sp. nov. The type strain of Dictyobacter aurantiacus is strain S-27T (=NBRC 109595T=InaCC B312T). Emendation of the description of the genus Thermosporothrix is also provided.
AB - A mesophilic, Gram-stain-positive, spore-forming bacterium that formed branched mycelia was isolated from paddy soil in Gunung Salak (Mount Salak), West Java, Indonesia. This strain, designated S-27T, grew at temperatures between 20 and 37 °C; the optimum growth temperature was 25 to 30 °C, and no growth was observed at 15 or 45 °C. The pH range for growth was pH 3.5 to 8.6; the optimum pH was 6.0, and no growth was observed at pH 3.0 or 9.2. Strain S-27T was able to hydrolyse polysaccharides such as starch, cellulose and xylan. The G+C content of the DNA of strain S-27T was 55.7 mol%. The major fatty acids were iso-C17: 0 and C16: 1 2-OH, and the major menaquinone was MK-9 (H2). The cell wall of strain S-27T contained Dglutamic acid, glycine, L-alanine, D-alanine, L-ornithine and β-alanine in a molar ratio of 1.0: 1.6: 1.4: 0.6: 0.9: 1.1. The polar lipids consisted of phosphatidylglycerol, phosphatidylinositol and two glycolipids. The major cell-wall sugar was arabinose. Detailed phylogenetic analysis based on 16S rRNA gene sequences indicated that strain S-27T belongs to the order Ktedonobacterales and is most closely related to Ktedonobacter racemifer SOSP1-21T (89.6% sequence identity). On the basis of its chemotaxonomic and phenotypic features and phylogenetic position, we concluded that strain S-27T represents a novel genus and species, for which we propose the name Dictyobacter aurantiacus gen. nov., sp. nov. The type strain of Dictyobacter aurantiacus is strain S-27T (=NBRC 109595T=InaCC B312T). Emendation of the description of the genus Thermosporothrix is also provided.
KW - Ktedonobacteria
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UR - http://www.scopus.com/inward/citedby.url?scp=85029527960&partnerID=8YFLogxK
U2 - 10.1099/ijsem.0.001985
DO - 10.1099/ijsem.0.001985
M3 - Article
C2 - 28758628
AN - SCOPUS:85029527960
SN - 1466-5026
VL - 67
SP - 2615
EP - 2621
JO - International Journal of Systematic Bacteriology
JF - International Journal of Systematic Bacteriology
IS - 8
M1 - 001985
ER -