TY - JOUR
T1 - Grading diffuse glioma based on 2021 WHO grade using self-attention-base deep learning architecture
T2 - variable Vision Transformer (vViT)
AU - Usuzaki, Takuma
AU - Takahashi, Kengo
AU - Inamori, Ryusei
AU - Morishita, Yohei
AU - Takagi, Hidenobu
AU - Shizukuishi, Takashi
AU - Toyama, Yoshitaka
AU - Abe, Mirei
AU - Ishikuro, Mami
AU - Obara, Taku
AU - Majima, Kazuhiro
AU - Takase, Kei
N1 - Publisher Copyright:
© 2024 Elsevier Ltd
PY - 2024/5
Y1 - 2024/5
N2 - Purpose: To evaluate the diagnostic performance of the self-attention-based model, termed variable Vision Transformer (vViT), in the task of predicting the grade of diffuse glioma based on the 2021 World Health Organization (WHO) central nervous system (CNS) tumor classification. Materials and Methods: This cross-sectional study analyzed adult patients with histopathologically confirmed diffuse glioma, following the 2021 WHO CNS tumor classification. We used age, sex, radiomic features, and four MRI sequences to predict the grade of gliomas. As binary classifications, we constructed three models: 2 vs. 3/4 (326 patients with 1575 grade 2 and 1574 grade 3/4 images), 3 vs. 2/4 (330 patients with 1726 grade 3 and 1726 grade 2/4 images), and 4 vs. 2/3 (333 patients with 3292 grade 4 and 3292 grade 2/3 images). As a multiclass classification, we constructed a 2 vs. 3 vs. 4 model (334 patients with 1575 grade 2, 1575 grade 3, and 1575 grade 4 images). Metrics including accuracy and area under the curve of the receiver operating characteristic (AUC-ROC) were calculated. Results: The highest accuracy and AUC-ROC were 0.84 (95% confidence interval; 0.75–0.93) in multiclass classification (2 vs. 3 vs. 4) and 0.94 (0.88–0.98) in 4 vs. 2/3, respectively. The highest Cohen's κ coefficient between ground truth and the predicted value was 0.54 obtained in the multiclass classification (2 vs. 3 vs. 4). Conclusions: The vViT is a competent multi-modal deep-learning model that can predict the grade of gliomas which were classified based on the 2021 WHO CNS tumor classification.
AB - Purpose: To evaluate the diagnostic performance of the self-attention-based model, termed variable Vision Transformer (vViT), in the task of predicting the grade of diffuse glioma based on the 2021 World Health Organization (WHO) central nervous system (CNS) tumor classification. Materials and Methods: This cross-sectional study analyzed adult patients with histopathologically confirmed diffuse glioma, following the 2021 WHO CNS tumor classification. We used age, sex, radiomic features, and four MRI sequences to predict the grade of gliomas. As binary classifications, we constructed three models: 2 vs. 3/4 (326 patients with 1575 grade 2 and 1574 grade 3/4 images), 3 vs. 2/4 (330 patients with 1726 grade 3 and 1726 grade 2/4 images), and 4 vs. 2/3 (333 patients with 3292 grade 4 and 3292 grade 2/3 images). As a multiclass classification, we constructed a 2 vs. 3 vs. 4 model (334 patients with 1575 grade 2, 1575 grade 3, and 1575 grade 4 images). Metrics including accuracy and area under the curve of the receiver operating characteristic (AUC-ROC) were calculated. Results: The highest accuracy and AUC-ROC were 0.84 (95% confidence interval; 0.75–0.93) in multiclass classification (2 vs. 3 vs. 4) and 0.94 (0.88–0.98) in 4 vs. 2/3, respectively. The highest Cohen's κ coefficient between ground truth and the predicted value was 0.54 obtained in the multiclass classification (2 vs. 3 vs. 4). Conclusions: The vViT is a competent multi-modal deep-learning model that can predict the grade of gliomas which were classified based on the 2021 WHO CNS tumor classification.
KW - Central nervous system
KW - Deep learning
KW - Neoplasm
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U2 - 10.1016/j.bspc.2024.106001
DO - 10.1016/j.bspc.2024.106001
M3 - Article
AN - SCOPUS:85183982536
SN - 1746-8094
VL - 91
JO - Biomedical Signal Processing and Control
JF - Biomedical Signal Processing and Control
M1 - 106001
ER -