TY - JOUR
T1 - Hybrid Particle-Field Molecular Dynamics Simulations of Charged Amphiphiles in an Aqueous Environment
AU - Kolli, Hima Bindu
AU - De Nicola, Antonio
AU - Bore, Sigbjørn Løland
AU - Schäfer, Ken
AU - Diezemann, Gregor
AU - Gauss, Jürgen
AU - Kawakatsu, Toshihiro
AU - Lu, Zhong Yuan
AU - Zhu, You Liang
AU - Milano, Giuseppe
AU - Cascella, Michele
N1 - Funding Information:
This work received the support of the Norwegian Research Council through the CoE Hylleraas Centre for Quantum Molecular Sciences (Grant No. 262695) and by the Norwegian Supercomputing Program (NOTUR) (Grant No. NN4654K). H.B.K. received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No. 704491. G.M. and A.D.N. wish to thank the HPC team of Enea (http://www. enea.it) for using the ENEA-GRID and the HPC facilities CRESCO (http://www.cresco.enea.it) in Portici. K.S., G.D., J.G., and M.C. acknowledge financial support by the Deutsche Forschungsgemeinschaft via the TRR 146 “Multiscale Simulation Methods for Soft Matter Systems”. Notes The authors declare no competing financial interest.
Funding Information:
This work received the support of the Norwegian Research Council through the CoE Hylleraas Centre for Quantum Molecular Sciences (Grant No. 262695) and by the Norwegian Supercomputing Program (NOTUR) (Grant No. NN4654K). H.B.K. received funding from the European Union's Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No. 704491.
Publisher Copyright:
© 2018 American Chemical Society.
PY - 2018/9/11
Y1 - 2018/9/11
N2 - We develop and test specific coarse-grained models for charged amphiphilic systems such as palmitoyloleoylphosphatidylglycerol (POPG) lipid bilayer and sodium dodecyl sulfate (SDS) surfactant in an aqueous environment, to verify the ability of the hybrid particle-field method to provide a realistic description of polyelectrolytes. According to the hybrid approach, the intramolecular interactions are treated by a standard molecular Hamiltonian, and the nonelectrostatic intermolecular forces are described by density fields. Electrostatics is introduced as an additional external field obtained by a modified particle-mesh Ewald procedure, as recently proposed [Zhu et al. Phys. Chem. Chem. Phys. 2016, 18, 9799 ]. Our results show that, upon proper calibration of key parameters, electrostatic forces can be correctly reproduced. Molecular dynamics simulations indicate that the methodology is robust with respect to the choice of the relative dielectric constant, yielding the same correct qualitative behavior for a broad range of values. In particular, our methodology reproduces well the organization of the POPG bilayer, as well as the SDS concentration-dependent change in the morphology of the micelles from spherical to microtubular aggregates. The inclusion of explicit electrostatics with good accuracy and low computational cost paves the way for a significant extension of the hybrid particle-field method to biological systems, where the polyelectrolyte component plays a fundamental role for both structural and dynamical molecular properties.
AB - We develop and test specific coarse-grained models for charged amphiphilic systems such as palmitoyloleoylphosphatidylglycerol (POPG) lipid bilayer and sodium dodecyl sulfate (SDS) surfactant in an aqueous environment, to verify the ability of the hybrid particle-field method to provide a realistic description of polyelectrolytes. According to the hybrid approach, the intramolecular interactions are treated by a standard molecular Hamiltonian, and the nonelectrostatic intermolecular forces are described by density fields. Electrostatics is introduced as an additional external field obtained by a modified particle-mesh Ewald procedure, as recently proposed [Zhu et al. Phys. Chem. Chem. Phys. 2016, 18, 9799 ]. Our results show that, upon proper calibration of key parameters, electrostatic forces can be correctly reproduced. Molecular dynamics simulations indicate that the methodology is robust with respect to the choice of the relative dielectric constant, yielding the same correct qualitative behavior for a broad range of values. In particular, our methodology reproduces well the organization of the POPG bilayer, as well as the SDS concentration-dependent change in the morphology of the micelles from spherical to microtubular aggregates. The inclusion of explicit electrostatics with good accuracy and low computational cost paves the way for a significant extension of the hybrid particle-field method to biological systems, where the polyelectrolyte component plays a fundamental role for both structural and dynamical molecular properties.
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U2 - 10.1021/acs.jctc.8b00466
DO - 10.1021/acs.jctc.8b00466
M3 - Article
C2 - 30037230
AN - SCOPUS:85050828442
SN - 1549-9618
VL - 14
SP - 4928
EP - 4937
JO - Journal of Chemical Theory and Computation
JF - Journal of Chemical Theory and Computation
IS - 9
ER -