TY - JOUR
T1 - Local spatio-temporal encoding of raw perfusion MRI for the prediction of final lesion in stroke
AU - Giacalone, Mathilde
AU - Rasti, Pejman
AU - Debs, Noelie
AU - Frindel, Carole
AU - Cho, Tae Hee
AU - Grenier, Emmanuel
AU - Rousseau, David
N1 - Funding Information:
This work was performed within the framework of the Labex PRIMES (ANR-11-LABX-0063) of Universite de Lyon, within the program “Investissements d'Avenir” (ANR-11-IDEX-0007) operated by the French National Research Agency (ANR).
Publisher Copyright:
© 2018
PY - 2018/12
Y1 - 2018/12
N2 - We address the medical image analysis issue of predicting the final lesion in stroke from early perfusion magnetic resonance imaging. The classical processing approach for the dynamical perfusion images consists in a temporal deconvolution to improve the temporal signals associated with each voxel before performing prediction. We demonstrate here the value of exploiting directly the raw perfusion data by encoding the local environment of each voxel as a spatio-temporal texture, with an observation scale larger than the voxel. As a first illustration for this approach, the textures are characterized with local binary patterns and the classification is performed using a standard support vector machine (SVM). This simple machine learning classification scheme demonstrates results with 95% accuracy on average while working only raw perfusion data. We discuss the influence of the observation scale and evaluate the interest of using post-processed perfusion data with this approach.
AB - We address the medical image analysis issue of predicting the final lesion in stroke from early perfusion magnetic resonance imaging. The classical processing approach for the dynamical perfusion images consists in a temporal deconvolution to improve the temporal signals associated with each voxel before performing prediction. We demonstrate here the value of exploiting directly the raw perfusion data by encoding the local environment of each voxel as a spatio-temporal texture, with an observation scale larger than the voxel. As a first illustration for this approach, the textures are characterized with local binary patterns and the classification is performed using a standard support vector machine (SVM). This simple machine learning classification scheme demonstrates results with 95% accuracy on average while working only raw perfusion data. We discuss the influence of the observation scale and evaluate the interest of using post-processed perfusion data with this approach.
KW - Dynamic susceptibility contrast perfusion MRI
KW - Local binary pattern
KW - Stroke
KW - Support vector machine
UR - http://www.scopus.com/inward/record.url?scp=85053935524&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85053935524&partnerID=8YFLogxK
U2 - 10.1016/j.media.2018.08.008
DO - 10.1016/j.media.2018.08.008
M3 - Article
C2 - 30268970
AN - SCOPUS:85053935524
SN - 1361-8415
VL - 50
SP - 117
EP - 126
JO - Medical Image Analysis
JF - Medical Image Analysis
ER -