Quantitative comparison of protein dynamics in live cells and in vitro by in-cell19F-NMR

Yousuke Takaoka; Yoshiyuki Kioi; Akira Morito; Junji Otani; Kyohei Arita; Eishi Ashihara; Mariko Ariyoshi; Hidehito Tochio; Masahiro Shirakawa; Itaru Hamachi

doi:10.1039/c3cc39205h

Quantitative comparison of protein dynamics in live cells and in vitro by in-cell¹⁹F-NMR

Yousuke Takaoka, Yoshiyuki Kioi, Akira Morito, Junji Otani, Kyohei Arita, Eishi Ashihara, Mariko Ariyoshi, Hidehito Tochio, Masahiro Shirakawa, Itaru Hamachi

SCI - Chemistry

Research output: Contribution to journal › Article › peer-review

38 Citations (Scopus)

Abstract

Here we describe how a¹⁹F-probe incorporated into an endogenous protein by a chemical biology method revealed protein dynamics. By explicit determination of ligand-bound and unbound structures with X-ray crystallography, the quantitative comparison of the protein's dynamics in live cells and in vitro is presented. These results clearly demonstrated the greater conformational fluctuations of the intracellular protein, partially due to macromolecular crowding effects.

Original language	English
Pages (from-to)	2801-2803
Number of pages	3
Journal	Chemical Communications
Volume	49
Issue number	27
DOIs	https://doi.org/10.1039/c3cc39205h
Publication status	Published - 2013 Mar 7

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abstract = "Here we describe how a19F-probe incorporated into an endogenous protein by a chemical biology method revealed protein dynamics. By explicit determination of ligand-bound and unbound structures with X-ray crystallography, the quantitative comparison of the protein's dynamics in live cells and in vitro is presented. These results clearly demonstrated the greater conformational fluctuations of the intracellular protein, partially due to macromolecular crowding effects.",

author = "Yousuke Takaoka and Yoshiyuki Kioi and Akira Morito and Junji Otani and Kyohei Arita and Eishi Ashihara and Mariko Ariyoshi and Hidehito Tochio and Masahiro Shirakawa and Itaru Hamachi",

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AU - Takaoka, Yousuke

AU - Kioi, Yoshiyuki

AU - Morito, Akira

AU - Otani, Junji

AU - Arita, Kyohei

AU - Ashihara, Eishi

AU - Ariyoshi, Mariko

AU - Tochio, Hidehito

AU - Shirakawa, Masahiro

AU - Hamachi, Itaru

PY - 2013/3/7

Y1 - 2013/3/7

N2 - Here we describe how a19F-probe incorporated into an endogenous protein by a chemical biology method revealed protein dynamics. By explicit determination of ligand-bound and unbound structures with X-ray crystallography, the quantitative comparison of the protein's dynamics in live cells and in vitro is presented. These results clearly demonstrated the greater conformational fluctuations of the intracellular protein, partially due to macromolecular crowding effects.

AB - Here we describe how a19F-probe incorporated into an endogenous protein by a chemical biology method revealed protein dynamics. By explicit determination of ligand-bound and unbound structures with X-ray crystallography, the quantitative comparison of the protein's dynamics in live cells and in vitro is presented. These results clearly demonstrated the greater conformational fluctuations of the intracellular protein, partially due to macromolecular crowding effects.

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U2 - 10.1039/c3cc39205h

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SP - 2801

EP - 2803

JO - Chemical Communications

JF - Chemical Communications

IS - 27

ER -

Quantitative comparison of protein dynamics in live cells and in vitro by in-cell¹⁹F-NMR

Abstract

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